Package: WaverideR 0.5.1

WaverideR: Extracting Signals from Wavelet Spectra

Tools for extracting and analyzing cyclic signals from time series.

Authors:Michiel Arts [aut, cre]

WaverideR_0.5.1.tar.gz
WaverideR_0.5.1.zip(r-4.7-any)WaverideR_0.5.1.zip(r-4.6-any)WaverideR_0.5.1.zip(r-4.5-any)
WaverideR_0.5.1.tgz(r-4.6-any)WaverideR_0.5.1.tgz(r-4.5-any)
WaverideR_0.5.1.tar.gz(r-4.7-any)WaverideR_0.5.1.tar.gz(r-4.6-any)
WaverideR_0.5.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
WaverideR/json (API)

# Install 'WaverideR' in R:
install.packages('WaverideR', repos = c('https://stratigraphy.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/stratigraphy/waverider/issues

Datasets:

On CRAN:

Conda:

cyclostratigraphygeologystratigraphy

3.95 score 3 stars 361 downloads 61 exports 152 dependencies

Last updated from:e2d3333ef8. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK249
source / vignettesOK255
linux-releaseOK227
macos-releaseOK197
macos-oldrelOK270
windows-develOK172
windows-releaseOK162
windows-oldrelOK162
wasm-releaseOK157

Exports:add_waveletadd_wavelet_avganalyze_Awaveletanalyze_superletanalyze_waveletanalyze_wavelet_coherenceanalyze_Xsuperletanalyze_Xwaveletanchor2timeastro_anchorcompleted_seriescurve2sedratecurve2timecurve2time_unccurve2time_unc_anchorcurve2tunedelpts_tracked_period_wtdur_gapsdynamic_extractioneha_log2expSedRampextract_amplitudeextract_powerextract_power_stableextract_signalextract_signal_stableextract_signal_stable_V2extract_signal_standard_deviationflmwgeo_colgeo_locgeo_midHilbert_transformlag_1lithlog_discloess_automax_detectmin_detectminimal_tuningmodel_red_noise_wtpercentile_from_red_noiseplot_astro_anchorplot_avg_waveletplot_Awaveletplot_eha_log2plot_sed_modelplot_superletplot_waveletplot_wavelet_coherenceplot_win_fftplot_win_timeOptplot_Xsuperletplot_Xwaveletretrack_wt_MCsedrate2tunesum_power_sedratetrack_periodtrack_period_waveletwavelet_uncertaintywin_fftwin_timeOpt

Dependencies:askpassastrochronbackportsbase64encbitbit64bootbslibcachemcellrangercheckmateclassclicliprclustercodetoolscolorednoisecolorRampscolorspacecommonmarkcpp11crayoncredentialscurldata.tableDecomposeRdescDescToolsdiagramdigestdoParalleldoSNOWdotCall64dplyre1071evaluateExactexpmfANCOVAfarverfastmapfieldsfontawesomeforcatsforeachforeignFormulafsgenericsgertggplot2gitcredsgldgluegridExtragtablehavenhexbinhighrHmischmshtmlTablehtmltoolshtmlwidgetshttpuvhttrhttr2IDPmisciniisobanditeratorsjquerylibjsonliteknitrlabelinglaterlatticelifecyclelmommagickmagrittrmapsMASSMatrixmatrixStatsmemoisemimemultitapermvtnormnnetopensslotelpakpalinsolpillarpkgconfigplyrprettyunitsprogresspromisesproxypurrrR6rappdirsRColorBrewerRcppRcppArmadilloreadrreadxlrematchreshapereshape2rlangrlistrmarkdownrootSolverpartrprojrootrstudioapiS7sassscalesscicoshapeshinysnowsourcetoolsspamStratigrapheRstringistringrsystibbletictoctidyselecttinytextrapezoidtruncnormtzdbusethisutf8vctrsviridisviridisLitevroomwhiskerwithrxfunXMLxtableyamlzip

Readme and manuals

Help Manual

Help pageTopics
Add a wavelet plotadd_wavelet
Add a plot of a the average spectral power of a continous wavelet transformadd_wavelet_avg
Age model of Zeeden et al., (2013) for the (154-174m) interval of the IODP 926 grey scale recordage_model_zeeden
Conduct the adaptive continuous wavelet transform on a time series or signalanalyze_Awavelet
Conduct the superlet transform on a time series or signalanalyze_superlet
Conduct the continuous wavelet transform on a time series/signalanalyze_wavelet
Cross-wavelet coherence analysisanalyze_wavelet_coherence
Conduct the cross superlet transform on a time series or signalanalyze_Xsuperlet
Conduct the cross wavelet transform on a time series or signalanalyze_Xwavelet
XRF records of the Bisciaro Fmanchor_points_Bisciaro_al
Example anchor points for the grey scale data set of Zeeden et al., (2013)anchor_points_grey
Convert a proxy record to the time domain using anchor pointsanchor2time
Anchor proxy record to an astronomical solutionastro_anchor
An ETP astronomical solutionastrosignal_example
Period of the short kyr ecc cycle in the Al record of the Bisciaro FmBisciaro_al_wt_track
Period of the short kyr ecc cycle in the Ca record of the Bisciaro FmBisciaro_ca_wt_track
Period of the short kyr ecc cycle in the Mg record of the Bisciaro FmBisciaro_Mg_wt_track
Period of the short kyr ecc cycle in the Mn record of the Bisciaro FmBisciaro_Mn_wt_track
Period of the short kyr ecc cycle in the si/Al record of the Bisciaro FmBisciaro_sial_wt_track
XRF records of the Bisciaro FmBisciaro_XRF
Complete the tracking of the period a cycle in a scalogramcompleted_series
Convert a tracked tracked to a sedimentation rate curvecurve2sedrate
Convert the tracked curve to a depth time spacecurve2time
Convert the re-tracked curve results to a depth time space with uncertaintycurve2time_unc
Convert the re-tracked curve results to a depth time space with uncertaintycurve2time_unc_anchor
Convert data from the depth to the time domaincurve2tune
Remove tracking points which were tracked in a wavelet spectradelpts_tracked_period_wt
An example depth rank seriesdepth_rank_example
calculate the duration of stratigraphic gaps using astronomical cyclesdur_gaps
Extract a signal in between tracked boundaries in a wavelet scalogramdynamic_extraction
Generate a log2 spaced EHA spectraeha_log2
exponentially ramped sedimentation rate model to convert time to stratigraphyexpSedRamp
Extract amplitude from a signalextract_amplitude
Extract power from a wavelet spectraextract_power
Extract power from a wavelet spectra by using a constant period/durationextract_power_stable
Extract signal from a wavelet spectra using a traced period curveextract_signal
Extract a signal/cycle from a wavelet spectra using a set period and boundariesextract_signal_stable
Extract signal from a wavelet spectrum using a upper and lower period boundaryextract_signal_stable_V2
Extract a signal using standard deviationextract_signal_standard_deviation
Fit linear models to spectral peaks extracted from the wavelet spectra to astronomical cycles multiplied by sedimentation rate xflmw
Generate standard color codes for the Geological Time Scalegeo_col
Generates ages for the boundaries of a geochronological subdivisiongeo_loc
Generate the mean age of a geological subdivisiongeo_mid
Grey scale record IODP 926 of Zeeden et al., (2013)grey
Tracking points of the precession (22 kyr cycle) IODP 926 grey scale (154-174m) record of Zeeden et al., (2013)grey_track
Information of the Geological timescale 2020GTS_info
Perform a Hilbert transform on a signalHilbert_transform
lag-1 autocorrelation coefficientlag_1
Discriticizes lithologslithlog_disc
Perform an automatically loess based smoothing of a time seriesloess_auto
Magnetic susceptibility data of the Sullivan core of Pas et al., (2018)mag
Period of the 405 kyr ecc cycle in the magnetic susceptibility record of the Sullivan coremag_track_solution
Detect and filter out all maxima in a signalmax_detect
Detect and filter out all minima in a signalmin_detect
Create an age model using minimal tuningminimal_tuning
Models average spectral power based curves based on a red-noise signal generated using the characteristics of an input signal.model_red_noise_wt
Calculate average spectral power from red noise curves for a given percentilepercentile_from_red_noise
Plot proxy record anchored to an astronomical solutionplot_astro_anchor
Plot the average spectral power of a wavelet spectraplot_avg_wavelet
Plots a adaptive wavelet scalogramplot_Awavelet
Plots an log2 spaced EHA spectraplot_eha_log2
Plot sedimentation modelling resultsplot_sed_model
Plots a superlet scalogramplot_superlet
Plots a wavelet scalogramplot_wavelet
Plots a cross wavelet scalogramplot_wavelet_coherence
Plot windowed fft based spectral analysis resultsplot_win_fft
plot the windowed timeOpt sedimentation rate estimationplot_win_timeOpt
Plots a cross superlet scalogramplot_Xsuperlet
Plots a cross wavelet scalogramplot_Xwavelet
Re-track cycles using a Monte-Carlo simulationretrack_wt_MC
Use a sedimentation curve to convert data to the time domainsedrate2tune
Calculate sum of maximum spectral power for sedimentation rates for a wavelet spectrasum_power_sedrate
Track the period of a cycle in a wavelet or superlet scalogramtrack_period
Track the period of a cycle in a wavelet spectratrack_period_wavelet
Total solar irradiation data (0-9400ka) of steinhilber et al., (2012)TSI
Calculate the uncertainty associated with the wavelet analysis based on the Gabor uncertainty principlewavelet_uncertainty
Extracting Signals from Wavelet SpectraWaverideR
Example data sets for the 'WaverideR' packageWaverideR_Datasets
Windowed fft based spectral analysiswin_fft
Windowed timeOpt sedimentation rate estimationwin_timeOpt